Basic Information
Locus ID:
Tel2E01G830600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 635267252 | 635268625 | + | Tel2E01G830600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 52,409.69 Da | 74.67 | 81.51 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 25 | 63 | 7.6E-4 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 22 | 66 | 1.96E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 186 | 397 | 1.94E-11 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 10 | 64 | 4.2E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 121 | 402 | 1.6E-13 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 23 | 71 | 9.232525 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 440 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| Coils | Coil | Coil | 391 | 411 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58310.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_040255850.1 | F-box/FBD/LRR-repeat protein At2g26030-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q9LQC1 | Putative F-box protein At1g58310 OS=Arabidopsis thaliana OX=3702 GN=At1g58310 PE=4 SV=2 | 0 | |
| TrEMBL | A0A3B6DLH8 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology