Basic Information
Locus ID:
Tel2E01G820900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
S-locus glycoprotein domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 631965274 | 631967893 | - | Tel2E01G820900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 38,173.46 Da | 37.27 | 96.40 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 21 | 93 | 1.93621E-18 | - |
| Pfam | PF00069 | Protein kinase domain | 176 | 339 | 1.1E-33 | IPR000719 |
| Pfam | PF08276 | PAN-like domain | 32 | 78 | 1.3E-11 | IPR003609 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 157 | 339 | 6.07E-54 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 129 | 249 | 2.7E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 250 | 339 | 4.3E-26 | - |
| SMART | SM00473 | ntp_6 | 2 | 92 | 0.0076 | IPR003609 |
| SMART | SM00220 | serkin_6 | 174 | 337 | 4.7E-8 | IPR000719 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 2 | 93 | 8.195997 | IPR003609 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 174 | 339 | 30.576801 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 180 | 202 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 295 | 307 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21390.2 | - | 0 |
| RefSeq | XP_048559336.1 | G-type lectin S-receptor-like serine/threonine-protein kinase B120 isoform X4 [Triticum urartu] | 0 |
| O81906 | G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana OX=3702 GN=B120 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7PK17 | Receptor-like serine/threonine-protein kinase OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg40932 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000048070 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g28740 |
| Poaceae | Thinopyrum elongatum | 3 | Tel2E01G820900, Tel2E01G914300, Tel2E01G914600 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC6AG016100 |
| Poaceae | Triticum aestivum | 2 | TraesCS2B02G511100.1, TraesCS7D02G404600.2 |