Basic Information
Locus ID:
Tel2E01G798700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 621992900 | 621993955 | - | Tel2E01G798700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 38,985.65 Da | 37.00 | 86.67 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 27 | 141 | 5.49076E-21 | IPR002083 |
| Pfam | PF00917 | MATH domain | 48 | 136 | 8.2E-5 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 172 | 278 | 4.4E-26 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 161 | 280 | 1.39E-30 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 27 | 149 | 5.4E-22 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 284 | 350 | 5.2E-14 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 25 | 148 | 6.4E-19 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 162 | 283 | 3.3E-32 | IPR011333 |
| SMART | SM00061 | math_3 | 32 | 131 | 2.5E-4 | IPR002083 |
| SMART | SM00225 | BTB_4 | 179 | 282 | 1.7E-24 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 25 | 149 | 13.615025 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 179 | 242 | 17.872293 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_044326176.1 | BTB/POZ and MATH domain-containing protein 1-like [Triticum aestivum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6CD98 | Speckle-type POZ protein-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0198040.1.CDS1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_038191, gene-QYE76_038194, gene-QYE76_038196 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G798600, Tel2E01G798700 |
| Poaceae | Triticum aestivum | 5 | TraesCS2A02G473300.1, TraesCS2A02G473400.1 ... |