HalophFGD

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Basic Information
Locus ID: Tel2E01G794300
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Speckle-type POZ protein-like protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 619358764 619359503 - Tel2E01G794300
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.03 17,962.91 Da 48.58 71.52 -0.28
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00121 MATH 29 74 1.91162E-8 IPR002083
Pfam PF00651 BTB/POZ domain 99 161 1.5E-14 IPR000210
SUPERFAMILY SSF49599 TRAF domain-like 29 76 3.27E-11 -
SUPERFAMILY SSF54695 POZ domain 84 161 1.65E-21 IPR011333
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 77 163 2.5E-24 IPR011333
ProSiteProfiles PS50097 BTB domain profile. 103 161 15.287044 IPR000210
MobiDBLite mobidb-lite consensus disorder prediction 1 21 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G19000.1 BTB-POZ and MATH domain 1. 0
RefSeq XP_037480741.1 BTB/POZ and MATH domain-containing protein 1-like [Triticum dicoccoides] 0
Swiss-Prot Q8L765 BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 0
TrEMBL A0A3B6B6L1 Speckle-type POZ protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 6 gene-QOZ80_4AG0303260, gene-QOZ80_4AG0303320 ...
gene-QOZ80_4BG0334120, gene-QOZ80_4BG0334130, gene-QOZ80_4BG0334140, gene-QOZ80_4BG0334200
Poaceae Hordeum vulgare 6 HORVU.MOREX.r3.2HG0197750.1.CDS1 ...
HORVU.MOREX.r3.2HG0197950.1, HORVU.MOREX.r3.4HG0414290.1.CDS1, HORVU.MOREX.r3.5HG0505400.1.CDS1, HORVU.MOREX.r3.5HG0505420.1.CDS1, HORVU.MOREX.r3.5HG0505450.1.CDS1
Poaceae Lolium multiflorum 9 gene-QYE76_035861, gene-QYE76_035864, gene-QYE76_046377 ...
gene-QYE76_046393, gene-QYE76_046396, gene-QYE76_046397, gene-QYE76_046981, gene-QYE76_071450, gene-QYE76_071452
Poaceae Oryza coarctata 3 Oco07G016400, Oco08G015840, Oco08G015850
Poaceae Oryza sativa 3 LOC_Os04g53390.1, LOC_Os04g53400.1, LOC_Os04g53410.1
Poaceae Paspalum vaginatum 5 gene-BS78_06G235200, gene-BS78_06G235500 ...
gene-BS78_06G235600, gene-BS78_06G235700, gene-BS78_06G235800
Poaceae Puccinellia tenuiflora 4 Pt_Chr0100721, Pt_Chr0100813, Pt_Chr0301063, Pt_Chr0301077
Poaceae Sporobolus alterniflorus 5 Chr04G014750, Chr23G004800, Chr23G004810, Chr23G004830 ...
Chr26G015990
Poaceae Thinopyrum elongatum 9 Tel2E01G791900, Tel2E01G792200, Tel2E01G793700 ...
Tel2E01G793800, Tel2E01G794300, Tel2E01G794400, Tel2E01G794500, Tel2E01G797000, Tel5E01G578000
Poaceae Triticum dicoccoides 11 gene_TRIDC2AG066820, gene_TRIDC2BG071830 ...
gene_TRIDC2BG072010, gene_TRIDC3BG076400, gene_TRIDC3BG082820, gene_TRIDC4AG068680, gene_TRIDC4AG068840, gene_TRIDC4BG060220, gene_TRIDC5AG074950, gene_TRIDC5AG078180, gene_TRIDC5BG057060
Poaceae Triticum aestivum 22 TraesCS2A02G470000.1.cds1, TraesCS2A02G470700.1.cds1 ...
TraesCS2A02G472700.1.cds1, TraesCS2B02G492800.1.cds1, TraesCS2B02G493600.1, TraesCS2B02G495400.1.cds1, TraesCS2D02G469800.1.cds1, TraesCS2D02G472400.1.cds1, TraesCS3D02G513100.1.cds1, TraesCS4A02G465200.1, TraesCS4A02G465700.1.cds1, TraesCS4B02G360000.1.cds1, TraesCS4B02G360400.1.cds1, TraesCS4B02G392200.1, TraesCS4D02G353300.1.cds1, TraesCS5A02G361900.1, TraesCS5A02G528500.1.cds1, TraesCS5A02G528600.1, TraesCS5A02G554900.1.cds1, TraesCS5B02G364400.1.cds1, TraesCS5D02G370700.1.cds1, TraesCSU02G034400.1.cds1
Poaceae Zoysia japonica 4 nbis-gene-22918, nbis-gene-56819, nbis-gene-58116 ...
nbis-gene-5895
Poaceae Zoysia macrostachya 2 Zma_g20488, Zma_g21998
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