Basic Information
Locus ID:
Tel2E01G792900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 618866782 | 618867351 | - | Tel2E01G792900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 21,319.85 Da | 26.18 | 69.52 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 30 | 154 | 4.51581E-14 | IPR002083 |
| Pfam | PF00917 | MATH domain | 49 | 150 | 1.4E-6 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 26 | 164 | 4.91E-25 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 26 | 161 | 3.5E-22 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 27 | 156 | 15.711723 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.2 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_037479407.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum dicoccoides] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6B5N5 | Speckle-type POZ protein-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0197780.1.CDS1 |
| Poaceae | Thinopyrum elongatum | 3 | Tel2E01G748200, Tel2E01G792900, Tel2E01G793600 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG066640, gene_TRIDC2BG071740 ... |
| Poaceae | Triticum aestivum | 4 | TraesCS2A02G470400.1.cds1, TraesCS2B02G493100.1 ... |