Basic Information
Locus ID:
Tel2E01G766700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
ABC transporter C family member 9
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 605229451 | 605237334 | - | Tel2E01G766700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 179,548.58 Da | 41.74 | 102.57 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 420 | 708 | 5.49631E-94 | IPR044746 |
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 1052 | 1344 | 8.31288E-90 | IPR044726 |
| CDD | cd03244 | ABCC_MRP_domain2 | 1367 | 1588 | 3.00234E-123 | - |
| CDD | cd03250 | ABCC_MRP_domain1 | 734 | 934 | 1.11527E-109 | - |
| Pfam | PF00005 | ABC transporter | 753 | 886 | 3.2E-18 | IPR003439 |
| Pfam | PF00005 | ABC transporter | 1386 | 1534 | 2.1E-29 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 419 | 687 | 1.6E-29 | IPR011527 |
| Pfam | PF00664 | ABC transporter transmembrane region | 1087 | 1296 | 1.8E-31 | IPR011527 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1359 | 1597 | 2.23E-65 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 1055 | 1349 | 9.03E-53 | IPR036640 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 414 | 719 | 1.19E-34 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 728 | 951 | 3.55E-55 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 389 | 719 | 1.5E-50 | IPR036640 |
| Gene3D | G3DSA:3.40.50.300 | - | 1352 | 1606 | 1.2E-80 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 729 | 961 | 3.4E-68 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 1015 | 1350 | 4.5E-58 | IPR036640 |
| SMART | SM00382 | AAA_5 | 1395 | 1589 | 4.3E-12 | IPR003593 |
| SMART | SM00382 | AAA_5 | 761 | 934 | 8.7E-11 | IPR003593 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 1052 | 1332 | 36.590542 | IPR011527 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 419 | 700 | 35.251957 | IPR011527 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1371 | 1604 | 16.113253 | IPR003439 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 734 | 957 | 21.742142 | IPR003439 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 859 | 873 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1008 | 1027 | - | - |
| Coils | Coil | Coil | 581 | 601 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60160.1 | multidrug resistance-associated protein 9. member of MRP subfamily | 0 |
| RefSeq | XP_044326003.1 | putative ABC transporter C family member 15 [Triticum aestivum] | 0 |
| Q9M1C7 | ABC transporter C family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCC9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6CEZ1 | ABC transmembrane type-1 domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology