Basic Information
Locus ID:
Tel2E01G748200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 595634882 | 595635565 | + | Tel2E01G748200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 25,399.71 Da | 29.19 | 78.55 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 30 | 154 | 1.04477E-13 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 185 | 224 | 5.0E-7 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 26 | 164 | 8.5E-24 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 172 | 227 | 2.88E-13 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 161 | 227 | 1.4E-16 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 26 | 160 | 2.2E-21 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 27 | 156 | 14.919069 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 192 | 227 | 11.398828 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.2 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_037479407.1 | BTB/POZ and MATH domain-containing protein 2-like [Triticum dicoccoides] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6B5N5 | Speckle-type POZ protein-like protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0197780.1.CDS1 |
| Poaceae | Thinopyrum elongatum | 3 | Tel2E01G748200, Tel2E01G792900, Tel2E01G793600 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG066640, gene_TRIDC2BG071740 ... |
| Poaceae | Triticum aestivum | 4 | TraesCS2A02G470400.1.cds1, TraesCS2B02G493100.1 ... |