HalophFGD

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Basic Information
Locus ID: Tel2E01G714100
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Plant protein of unknown function
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 573141290 573142462 + Tel2E01G714100
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.48 43,903.81 Da 41.65 87.72 -0.27
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03478 Protein of unknown function (DUF295) 293 338 8.3E-9 IPR005174
SUPERFAMILY SSF81383 F-box domain 9 52 5.76E-8 IPR036047
Gene3D G3DSA:1.20.1280.50 - 15 55 2.8E-8 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_020186218.1 putative F-box protein At3g25750 [Aegilops tauschii subsp. strangulata] 0
TrEMBL A0A3B6DJ15 DUF295 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Hordeum vulgare 6 HORVU.MOREX.r3.2HG0105960.1.CDS1 ...
HORVU.MOREX.r3.2HG0190420.1.CDS1, HORVU.MOREX.r3.3HG0225870.1, HORVU.MOREX.r3.3HG0312970.1.CDS1, HORVU.MOREX.r3.3HG0327240.1.CDS1, HORVU.MOREX.r3.7HG0712730.1.CDS1
Poaceae Lolium multiflorum 23 gene-QYE76_005955, gene-QYE76_007209, gene-QYE76_007223 ...
gene-QYE76_007226, gene-QYE76_018533, gene-QYE76_021062, gene-QYE76_049470, gene-QYE76_049475, gene-QYE76_050553, gene-QYE76_058532, gene-QYE76_058536, gene-QYE76_058604, gene-QYE76_058605, gene-QYE76_058607, gene-QYE76_058608, gene-QYE76_058721, gene-QYE76_058733, gene-QYE76_059049, gene-QYE76_060355, gene-QYE76_060357, gene-QYE76_060361, gene-QYE76_063937, gene-QYE76_064483
Poaceae Oryza coarctata 1 Oco01G030920
Poaceae Puccinellia tenuiflora 29 Pt_Chr0106145, Pt_Chr0106146, Pt_Chr0106147, Pt_Chr0106148 ...
Pt_Chr0200552, Pt_Chr0203187, Pt_Chr0304372, Pt_Chr0304446, Pt_Chr0305615, Pt_Chr0305834, Pt_Chr0306377, Pt_Chr0400941, Pt_Chr0400942, Pt_Chr0601068, Pt_Chr0604813, Pt_Chr0604814, Pt_Chr0604815, Pt_Chr0700799, Pt_Chr0700801, Pt_Chr0700802, Pt_Chr0700828, Pt_Chr0700829, Pt_Chr0700830, Pt_Chr0700831, Pt_Chr0700835, Pt_Chr0700836, Pt_Chr0700948, Pt_Chr0702459, Pt_Chr0702460
Poaceae Thinopyrum elongatum 5 Tel2E01G714100, Tel3E01G083700, Tel3E01G849800 ...
Tel3E01G867800, Tel3E01G878500
Poaceae Triticum dicoccoides 16 gene_TRIDC2AG006540, gene_TRIDC2BG007550 ...
gene_TRIDC2BG007590, gene_TRIDC3AG004030, gene_TRIDC3AG073700, gene_TRIDC3BG006260, gene_TRIDC3BG084420, gene_TRIDC3BG084430, gene_TRIDC3BG084570, gene_TRIDC3BG084730, gene_TRIDC3BG085440, gene_TRIDC3BG086230, gene_TRIDC5BG077300, gene_TRIDC5BG077310, gene_TRIDC6BG073050, gene_TRIDC7AG026340
Poaceae Triticum aestivum 22 TraesCS2A02G419700.1.cds1, TraesCS2B02G438800.1.cds1 ...
TraesCS2D02G058800.1.cds1, TraesCS2D02G357300.1, TraesCS2D02G416800.1.cds1, TraesCS2D02G416900.1.cds1, TraesCS3A02G037100.1, TraesCS3A02G520800.1.cds1, TraesCS3B02G012400.1.cds1, TraesCS3B02G046800.2, TraesCS3B02G585200.1.cds1, TraesCS3B02G590100.1.cds1, TraesCS3B02G591200.1.cds1, TraesCS3D02G042600.1, TraesCS3D02G440800.1, TraesCS3D02G528700.1.cds1, TraesCS4A02G354400.1.cds1, TraesCS5B02G518000.1.cds1, TraesCS6B02G461100.1.cds1, TraesCS6D02G010700.1.cds1, TraesCSU02G154000.1.cds1, TraesCSU02G202400.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.