HalophFGD

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Basic Information
Locus ID: Tel2E01G675200
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 541334942 541335760 + Tel2E01G675200
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.89 29,475.76 Da 43.31 88.61 -0.03
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 20 73 2.75E-5 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044417238.1 uncharacterized protein LOC123142353 [Triticum aestivum] 0
TrEMBL A0A7H4LL19 Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS3922 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 19 AH01.3106, AH01.368, AH09.2135, AH09.2136, AH09.2137 ...
AH09.2138, BH01.3455, BH09.2298, BH09.2299, BH09.2300, BH09.2301, CH01.203, CH01.204, CH01.205, CH03.3383, CH09.2438, CH09.2439, CH09.2440, CH09.2441
Poaceae Eleusine coracana subsp. coracana 14 gene-QOZ80_2AG0114730, gene-QOZ80_2BG0156030 ...
gene-QOZ80_3AG0210640, gene-QOZ80_3AG0210690, gene-QOZ80_3BG0255740, gene-QOZ80_3BG0255860, gene-QOZ80_4AG0305690, gene-QOZ80_4AG0305710, gene-QOZ80_4AG0305720, gene-QOZ80_4AG0305730, gene-QOZ80_4AG0305740, gene-QOZ80_4AG0305750, gene-QOZ80_4BG0336650, gene-QOZ80_4BG0336680
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.5HG0432080.1.CDS1 ...
HORVU.MOREX.r3.5HG0432100.1.CDS1
Poaceae Lolium multiflorum 3 gene-QYE76_019545, gene-QYE76_021068, gene-QYE76_024580
Poaceae Oryza coarctata 5 Oco07G014550, Oco08G014010, Oco15G012000, Oco16G009760 ...
Oco16G010590
Poaceae Oryza sativa 6 LOC_Os04g50200.1, LOC_Os08g36960.1, LOC_Os08g38330.1 ...
LOC_Os08g38350.1, LOC_Os08g38360.1, LOC_Os12g42000.1
Poaceae Paspalum vaginatum 1 gene-BS78_05G098500
Poaceae Puccinellia tenuiflora 2 Pt_Chr0100980, Pt_Chr0600001
Poaceae Sporobolus alterniflorus 1 Chr06G028970
Poaceae Thinopyrum elongatum 1 Tel2E01G675200
Poaceae Triticum aestivum 2 TraesCS2D02G570200.1.cds1, TraesCSU02G090300.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.