Basic Information
Locus ID:
Tel2E01G644100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 517850425 | 517855653 | - | Tel2E01G644100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 86,215.61 Da | 61.84 | 63.04 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 305 | 624 | 1.22028E-39 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 306 | 338 | 3.7E-7 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 452 | 489 | 9.2E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 411 | 447 | 7.3E-8 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 303 | 630 | 9.97E-57 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 292 | 650 | 8.5E-61 | IPR015943 |
| SMART | SM00320 | WD40_4 | 409 | 447 | 5.6E-11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 583 | 624 | 0.11 | IPR001680 |
| SMART | SM00320 | WD40_4 | 300 | 339 | 5.5E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 492 | 530 | 1.9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 546 | 582 | 11.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 450 | 489 | 5.6E-9 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 456 | 490 | 11.377324 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 416 | 450 | 11.181047 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 307 | 340 | 14.451798 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 416 | 456 | 14.384962 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 307 | 340 | 11.945589 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 456 | 490 | 9.520146 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 434 | 448 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 326 | 340 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 326 | 340 | 3.8E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 476 | 490 | 3.8E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 434 | 448 | 3.8E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 283 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 728 | 754 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 222 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54200.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_044333492.1 | WD repeat-containing protein 44-like isoform X2 [Triticum aestivum] | 0 |
| Q498F0 | WD repeat-containing protein 44 OS=Xenopus laevis OX=8355 GN=wdr44 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1D5UQ15 | Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS3724 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology