Basic Information
Locus ID:
Tel2E01G644000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
catalytic domain of ctd-like phosphatases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 517837956 | 517847181 | - | Tel2E01G644000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 107,107.62 Da | 52.10 | 75.07 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03031 | NLI interacting factor-like phosphatase | 255 | 363 | 3.6E-6 | IPR004274 |
| SUPERFAMILY | SSF56784 | HAD-like | 133 | 389 | 2.88E-20 | IPR036412 |
| SUPERFAMILY | SSF54768 | dsRNA-binding domain-like | 720 | 781 | 5.79E-9 | - |
| SUPERFAMILY | SSF54768 | dsRNA-binding domain-like | 845 | 915 | 1.37E-9 | - |
| Gene3D | G3DSA:3.30.160.20 | - | 716 | 785 | 1.3E-6 | - |
| Gene3D | G3DSA:3.40.50.1000 | - | 133 | 395 | 3.5E-25 | IPR023214 |
| SMART | SM00358 | DRBM_3 | 717 | 782 | 3.0E-4 | IPR014720 |
| SMART | SM00358 | DRBM_3 | 844 | 911 | 0.016 | IPR014720 |
| SMART | SM00577 | forpap2 | 214 | 374 | 8.8E-9 | IPR004274 |
| ProSiteProfiles | PS50137 | Double stranded RNA-binding domain (dsRBD) profile. | 843 | 912 | 9.489197 | IPR014720 |
| ProSiteProfiles | PS50969 | FCP1 homology domain profile. | 139 | 390 | 15.503305 | IPR004274 |
| ProSiteProfiles | PS50137 | Double stranded RNA-binding domain (dsRBD) profile. | 746 | 783 | 10.921499 | IPR014720 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 917 | 961 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 552 | 573 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 596 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21670.1 | C-terminal domain phosphatase-like 1. encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl. | 0 |
| RefSeq | XP_037486391.1 | RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1 [Triticum dicoccoides] | 0 |
| Q5YDB6 | RNA polymerase II C-terminal domain phosphatase-like 1 OS=Arabidopsis thaliana OX=3702 GN=CPL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6B1W0 | protein-serine/threonine phosphatase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology