Basic Information
Locus ID:
Tel2E01G638800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 513429300 | 513434122 | - | Tel2E01G638800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 71,623.76 Da | 36.09 | 96.91 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 365 | 633 | 4.8E-13 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 178 | 196 | 0.94 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 37 | 77 | 2.8E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 106 | 165 | 8.5E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 237 | 1.17E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 349 | 634 | 5.98E-33 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 445 | 649 | 4.4E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 152 | 250 | 9.6E-20 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 337 | 443 | 4.1E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 151 | 7.7E-33 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 215 | 238 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 128 | 152 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 104 | 127 | 84.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 176 | 199 | 27.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 362 | 640 | 15.721969 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | 5.0 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63430.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_044325228.1 | probable LRR receptor-like serine/threonine-protein kinase At1g63430 [Triticum aestivum] | 0 |
| C0LGH8 | Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana OX=3702 GN=At1g63430 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6C9N3 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH09.1708, BH09.1892, CH09.2036 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0309260, gene-QOZ80_4BG0340270 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0184300.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_007607, gene-QYE76_045198 |
| Poaceae | Oryza coarctata | 2 | Oco07G011610, Oco08G011260 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g45170.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G171100 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0301887, Pt_Chr0301907, Pt_Chr0301910 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr23G007910, Chr25G006520, Chr26G011800, Chr30G006370 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G638800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG053330, gene_TRIDC2BG056190 |
| Poaceae | Triticum aestivum | 2 | TraesCS2A02G368700.2, TraesCS2B02G385900.1 |
| Poaceae | Zea mays | 1 | Zm00001eb075560_P005 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-5380 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g21688 |