Basic Information
Locus ID:
Tel2E01G623500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 505023579 | 505030196 | - | Tel2E01G623500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 77,717.87 Da | 52.31 | 62.69 | -0.86 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 551 | 595 | 0.00302708 | IPR002999 |
| SUPERFAMILY | SSF48371 | ARM repeat | 58 | 237 | 5.23E-6 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 548 | 590 | 8.27E-8 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 540 | 597 | 8.0E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 599 | 717 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 369 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 617 | 666 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 677 | 717 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 545 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 527 | 541 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 519 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 424 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_020166747.1 | LOW QUALITY PROTEIN: nucleolar protein dao-5 [Aegilops tauschii subsp. strangulata] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | M8BX21 | Sister chromatid cohesion protein PDS5 OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology