Basic Information
Locus ID:
Tel2E01G607000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
serine threonine-protein kinase GCN2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 495657185 | 495672021 | - | Tel2E01G607000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 140,275.55 Da | 49.06 | 81.99 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14046 | STKc_EIF2AK4_GCN2_rpt2 | 432 | 742 | 5.02904E-127 | - |
| Pfam | PF13393 | Histidyl-tRNA synthetase | 837 | 1124 | 8.8E-16 | IPR041715 |
| Pfam | PF05773 | RWD domain | 34 | 142 | 1.4E-11 | IPR006575 |
| Pfam | PF12745 | Anticodon binding domain of tRNAs | 1144 | 1239 | 3.6E-11 | IPR024435 |
| Pfam | PF00069 | Protein kinase domain | 438 | 741 | 5.8E-52 | IPR000719 |
| SUPERFAMILY | SSF54495 | UBC-like | 32 | 142 | 1.79E-18 | IPR016135 |
| SUPERFAMILY | SSF52954 | Class II aaRS ABD-related | 1143 | 1239 | 9.46E-13 | - |
| SUPERFAMILY | SSF55681 | Class II aaRS and biotin synthetases | 802 | 1127 | 7.05E-30 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 434 | 744 | 5.19E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.930.10 | Bira Bifunctional Protein; Domain 2 | 796 | 1128 | 1.2E-61 | - |
| Gene3D | G3DSA:3.40.50.800 | - | 1140 | 1240 | 1.2E-19 | IPR036621 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 23 | 154 | 1.5E-24 | IPR016135 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 426 | 555 | 2.3E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 560 | 749 | 2.6E-44 | - |
| SMART | SM00591 | RWD2001b | 35 | 145 | 6.0E-16 | IPR006575 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 438 | 752 | 42.011208 | IPR000719 |
| ProSiteProfiles | PS50908 | RWD domain profile. | 35 | 145 | 18.826324 | IPR006575 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 444 | 468 | - | IPR017441 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 595 | 607 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 228 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 262 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 298 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 316 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59410.1 | protein kinase family protein. | 0 |
| RefSeq | XP_037486149.1 | eIF-2-alpha kinase GCN2-like [Triticum dicoccoides] | 0 |
| Q9LX30 | eIF-2-alpha kinase GCN2 OS=Arabidopsis thaliana OX=3702 GN=GCN2 PE=2 SV=2 | 0 | |
| TrEMBL | F4NAR5 | non-specific serine/threonine protein kinase OS=Triticum aestivum OX=4565 GN=TaGCN2 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg27616 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_2896 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah019387, Ah036333 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g057120 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg15230, Sbi_jg56041 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg26524 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00006316 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl01738, Sgl01741, Sgl06900 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000013908, gene:ENSEOMG00000031252 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.3AG0009870, CQ.Regalona.r1.3BG0010010 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30244140 |
| Apiaceae | Apium graveolens | 2 | Ag5G02837, AgUnG00530 |
| Arecaceae | Cocos nucifera | 2 | COCNU_02G012600, COCNU_02G012610 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103708605 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_09.470.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri14G13837 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G59410.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10005755m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g03730.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g073650.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G1448 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G1541 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno07g11000 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0137s00008.v1.0, Dusal.0137s00010.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate03g21560 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-4251 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG11.187 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00025198 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb4G25713 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.1401, BH09.1588, CH09.1708 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_4AG0312470, gene-QOZ80_4AG0312480 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0177670.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_044846 |
| Poaceae | Oryza coarctata | 1 | Oco08G009280 |
| Poaceae | Oryza sativa | 2 | LOC_Os04g41510.1, LOC_Os04g41530.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G144600 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0302298, Pt_Chr0307175 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr25G009740, Chr30G009580 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G607000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG050550, gene_TRIDC2BG053750 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G349200.3, TraesCS2B02G367600.4 ... |
| Poaceae | Zea mays | 1 | Zm00001eb078800_P002 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-5128, nbis-gene-58808 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g21519 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG05.1408, evm.TU.LG07.1475 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc05g06860 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_3_RagTag.1486 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-1803 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-20556 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-2714 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000019l.342 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00002101 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-15794 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-12868 |
| Salicaceae | Populus euphratica | 1 | populus_peu22604 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132643742 |
| Solanaceae | Solanum chilense | 4 | SOLCI002746500, SOLCI002746700, SOLCI004340500 ... |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107004566 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_5319 |
| Tamaricaceae | Tamarix chinensis | 2 | TC06G1310, TC06G1313 |
| Zosteraceae | Zostera marina | 1 | Zosma04g02150.v3.1 |