Basic Information
Locus ID:
Tel2E01G581500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Glycerophosphoryl diester phosphodiesterase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 475465118 | 475469574 | + | Tel2E01G581500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 81,329.68 Da | 40.05 | 83.24 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 352 | 652 | 1.91558E-171 | - |
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 37 | 335 | 6.91175E-178 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 357 | 648 | 6.2E-44 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 36 | 335 | 7.06E-41 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 351 | 652 | 2.62E-50 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 350 | 653 | 1.3E-53 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 35 | 335 | 9.5E-29 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 352 | 653 | 38.365101 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 37 | 336 | 30.074478 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55480.1 | SHV3-like 1. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_037478156.1 | glycerophosphodiester phosphodiesterase GDPDL4-like [Triticum dicoccoides] | 0 |
| Q9FJ62 | Glycerophosphodiester phosphodiesterase GDPDL4 OS=Arabidopsis thaliana OX=3702 GN=GDPDL4 PE=1 SV=1 | 0 | |
| TrEMBL | M8ACN0 | glycerophosphodiester phosphodiesterase OS=Triticum urartu OX=4572 GN=TRIUR3_13703 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology