Basic Information
Locus ID:
Tel2E01G547900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 449706382 | 449707212 | - | Tel2E01G547900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 28,377.88 Da | 39.50 | 88.44 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 106 | 149 | 1.56388E-20 | - |
| Pfam | PF13639 | Ring finger domain | 106 | 149 | 2.3E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 87 | 155 | 3.53E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 86 | 157 | 1.6E-19 | IPR013083 |
| SMART | SM00184 | ring_2 | 107 | 148 | 6.9E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 107 | 149 | 12.533537 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 276 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53820.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_048561055.1 | E3 ubiquitin-protein ligase EL5-like [Triticum urartu] | 0 |
| Q9LRB7 | E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica OX=39947 GN=EL5.1 PE=1 SV=1 | 0 | |
| TrEMBL | M7Z690 | E3 ubiquitin-protein ligase EL5 OS=Triticum urartu OX=4572 GN=TRIUR3_12860 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology