Basic Information
Locus ID:
Tel2E01G511200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Short Name:
AFB3
Description:
F-box-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 413181577 | 413185514 | - | Tel2E01G511200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 64,037.61 Da | 47.49 | 94.77 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF18791 | Transport inhibitor response 1 protein domain | 61 | 107 | 2.3E-23 | IPR041101 |
| Pfam | PF18511 | F-box | 1 | 41 | 8.5E-16 | IPR041567 |
| SUPERFAMILY | SSF81383 | F-box domain | 1 | 35 | 5.76E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 64 | 532 | 2.22E-36 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 40 | 9.9E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 574 | 1.7E-178 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 475 | 499 | 330.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 309 | 332 | 290.0 | IPR006553 |
| SMART | SM00256 | fbox_2 | 4 | 45 | 0.0021 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 426 | 449 | 200.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 99 | 123 | 21.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 124 | 149 | 51.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 366 | 390 | 0.59 | IPR006553 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26810.1 | auxin signaling F-box 2. | 0 |
| RefSeq | XP_044457332.1 | transport inhibitor response 1-like protein Os04g0395600 [Triticum aestivum] | 0 |
| Q7XVM8 | Transport inhibitor response 1-like protein Os04g0395600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0395600 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8R7PFK7 | F-box domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology