HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Tel2E01G469400
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Protein kinase domain
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 362838142 362842230 - Tel2E01G469400
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.61 81,296.26 Da 46.94 90.95 -0.10
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00069 Protein kinase domain 400 666 3.9E-18 IPR000719
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 378 668 2.11E-39 IPR011009
SUPERFAMILY SSF52058 L domain-like 92 238 7.99E-19 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 465 686 1.9E-29 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 363 464 5.4E-17 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 28 260 5.3E-26 IPR032675
ProSiteProfiles PS50011 Protein kinase domain profile. 392 673 19.820827 IPR000719
MobiDBLite mobidb-lite consensus disorder prediction 332 364 - -
MobiDBLite mobidb-lite consensus disorder prediction 332 347 - -
MobiDBLite mobidb-lite consensus disorder prediction 719 757 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G16250.1 Leucine-rich repeat protein kinase family protein. 0
RefSeq XP_048556649.1 probable LRR receptor-like serine/threonine-protein kinase At2g16250 [Triticum urartu] 0
Swiss-Prot C0LGK4 Probable LRR receptor-like serine/threonine-protein kinase At2g16250 OS=Arabidopsis thaliana OX=3702 GN=At2g16250 PE=1 SV=1 0
TrEMBL A0A8R7PES1 Protein kinase domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 6 AH01.59, AH03.174, BH01.582, BH03.225, CH01.560, CH03.287
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_3AG0214210, gene-QOZ80_3BG0259360 ...
gene-QOZ80_7AG0554910, gene-QOZ80_7BG0585980
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.2HG0154130.1, HORVU.MOREX.r3.5HG0513770.1
Poaceae Lolium multiflorum 1 gene-QYE76_042414
Poaceae Oryza coarctata 4 Oco05G024810, Oco06G025730, Oco13G001060, Oco14G001130
Poaceae Oryza sativa 2 LOC_Os03g56250.1, LOC_Os07g04220.1
Poaceae Paspalum vaginatum 2 gene-BS78_01G065200, gene-BS78_02G028300
Poaceae Puccinellia tenuiflora 4 Pt_Chr0106936, Pt_Chr0107412, Pt_Chr0303483, Pt_Chr0303502
Poaceae Sporobolus alterniflorus 4 Chr01G003930, Chr12G036240, Chr24G001840, Chr28G000670
Poaceae Thinopyrum elongatum 3 Tel2E01G469400, Tel5E01G386400, Tel5E01G642800
Poaceae Triticum dicoccoides 4 gene_TRIDC2AG035750, gene_TRIDC2BG039760 ...
gene_TRIDC5AG059130, gene_TRIDC5BG063310
Poaceae Triticum aestivum 6 TraesCS2A02G255300.1, TraesCS2B02G266900.1 ...
TraesCS2D02G255700.1, TraesCS5A02G407300.1, TraesCS5B02G412200.1, TraesCS5D02G417200.1
Poaceae Zea mays 3 Zm00001eb059020_P001, Zm00001eb059030_P001 ...
Zm00001eb299520_P001
Poaceae Zoysia japonica 5 nbis-gene-15213, nbis-gene-35819, nbis-gene-53941 ...
nbis-gene-56632, nbis-gene-57082
Poaceae Zoysia macrostachya 2 Zma_g379, Zma_g5938
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.