Basic Information
Locus ID:
Tel2E01G460100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 348447225 | 348458453 | - | Tel2E01G460100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 98,380.37 Da | 45.99 | 76.48 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 729 | 882 | 9.09993E-60 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 248 | 881 | 1.6E-80 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 246 | 883 | 4.71E-106 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 611 | 884 | 8.4E-55 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 239 | 482 | 2.2E-65 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 248 | 884 | 54.322838 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 827 | 844 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 249 | 264 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_020191178.1 | ubiquitin carboxyl-terminal hydrolase 8 [Aegilops tauschii subsp. strangulata] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7H4LGW0 | Ubiquitin carboxyl-terminal hydrolase OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS2458 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology