Basic Information
Locus ID:
Tel2E01G453600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Bromo adjacent homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 335799334 | 335818304 | + | Tel2E01G453600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.02 | 24,844.70 Da | 64.85 | 54.75 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00628 | PHD-finger | 143 | 191 | 2.5E-10 | IPR019787 |
| Pfam | PF01426 | BAH domain | 26 | 138 | 1.4E-21 | IPR001025 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 133 | 195 | 8.42E-19 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 134 | 208 | 1.3E-20 | IPR013083 |
| Gene3D | G3DSA:2.30.30.490 | - | 14 | 133 | 1.4E-26 | IPR043151 |
| SMART | SM00249 | PHD_3 | 143 | 190 | 2.8E-9 | IPR001965 |
| SMART | SM00439 | BAH_4 | 22 | 139 | 3.3E-35 | IPR001025 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 22 | 139 | 22.214182 | IPR001025 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 141 | 192 | 9.445499 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 144 | 189 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 202 | 219 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22140.2 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein. | 0 |
| RefSeq | XP_044331984.1 | chromatin remodeling protein SHL-like isoform X2 [Triticum aestivum] | 0 |
| Q9FEN9 | Chromatin remodeling protein SHL OS=Arabidopsis thaliana OX=3702 GN=SHL PE=1 SV=1 | 0 | |
| TrEMBL | A0A287I154 | PHD-type domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology