Basic Information
Locus ID:
Tel2E01G452500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 332163315 | 332174666 | - | Tel2E01G452500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 132,680.59 Da | 40.01 | 79.33 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 58 | 181 | 9.35884E-38 | IPR002083 |
| CDD | cd02659 | peptidase_C19C | 199 | 545 | 2.26659E-161 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 201 | 540 | 5.2E-47 | IPR001394 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 644 | 896 | 9.8E-74 | IPR024729 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 906 | 1114 | 9.8E-57 | IPR029346 |
| Pfam | PF00917 | MATH domain | 63 | 183 | 5.5E-18 | IPR002083 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 196 | 571 | 7.65E-92 | IPR038765 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 57 | 191 | 8.01E-40 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 705 | 820 | 7.6E-41 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 56 | 197 | 3.8E-51 | IPR008974 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 198 | 544 | 2.5E-84 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 822 | 919 | 2.5E-27 | - |
| SMART | SM00061 | math_3 | 58 | 162 | 1.0E-18 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 201 | 543 | 38.300789 | IPR028889 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 56 | 181 | 36.678711 | IPR002083 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 202 | 217 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 459 | 476 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
| Coils | Coil | Coil | 556 | 583 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.2 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_044965933.1 | ubiquitin C-terminal hydrolase 12-like isoform X2 [Hordeum vulgare subsp. vulgare] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8I7B2U1 | ubiquitinyl hydrolase 1 OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology