halophFGD

Basic Information

Locus ID: Tel2E01G452200

Species & Taxonomic ID: Thinopyrum elongatum & 4588

Genome Assembly: GWHABKY00000000

Short Name: P5CS

Description: P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr2	331204168	331207803	-	Tel2E01G452200

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.30	18,178.85 Da	44.35	64.84	-0.97

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	7	24	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	45	64	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	25	44	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	64	-	-

KEGG Pathway

KO Term:

K12657 (delta-1-pyrroline-5-carboxylate synthetase [EC:2.7.2.11 1.2.1.41])

Pathway:

ko00330 (Arginine and proline metabolism) map00330 (Arginine and proline metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites) ko01230 (Biosynthesis of amino acids) map01230 (Biosynthesis of amino acids)

Module:

M00015 (Proline biosynthesis, glutamate => proline)

Reaction:

R00239 (ATP + L-Glutamate <=> ADP + L-Glutamyl 5-phosphate) R03313 (L-Glutamate 5-semialdehyde + Orthophosphate + NADP+ <=> L-Glutamyl 5-phosphate + NADPH + H+)

Best hit

Source	Best Hit ID	Description
RefSeq	XP_003564608.1	delta-1-pyrroline-5-carboxylate synthase 2 [Brachypodium distachyon]
Swiss-Prot	Q941T1	Delta-1-pyrroline-5-carboxylate synthase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=P5CS2 PE=2 SV=1
TrEMBL	R7WD43	Delta-1-pyrroline-5-carboxylate synthetase OS=Aegilops tauschii OX=37682 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	2	BH01.1546, BH02.1349
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.3HG0245280.1
Poaceae	Thinopyrum elongatum	34	Tel1E01G099300, Tel1E01G144300, Tel1E01G372700 ... Tel1E01G416300, Tel2E01G069100, Tel2E01G072400, Tel2E01G077200, Tel2E01G277000, Tel2E01G407500, Tel2E01G452200, Tel2E01G545900, Tel2E01G657600, Tel2E01G793900, Tel3E01G107600, Tel3E01G188500, Tel3E01G687100, Tel3E01G889100, Tel4E01G018700, Tel5E01G025400, Tel5E01G184700, Tel5E01G478800, Tel5E01G489300, Tel6E01G074300, Tel6E01G132200, Tel6E01G298000, Tel6E01G517400, Tel6E01G630900, Tel6E01G659700, Tel6E01G719100, Tel6E01G732000, Tel7E01G1004300, Tel7E01G268400, Tel7E01G382000, Tel7E01G572400
Poaceae	Triticum dicoccoides	10	gene_TRIDC1AG019590, gene_TRIDC1AG026440 ... gene_TRIDC1BG003010, gene_TRIDC3AG018380, gene_TRIDC4AG012810, gene_TRIDC5AG072190, gene_TRIDC5BG024690, gene_TRIDC6AG012730, gene_TRIDC7AG040710, gene_TRIDC7BG001160
Poaceae	Triticum aestivum	31	TraesCS1A02G172200.1, TraesCS1A02G173300.1 ... TraesCS1B02G100500.1, TraesCS2A02G107400.1, TraesCS2D02G239400.1.cds1, TraesCS2D02G420300.1, TraesCS3B02G398700.1, TraesCS3D02G342300.1.cds1, TraesCS3D02G442900.1, TraesCS4A02G094200.1, TraesCS4A02G097600.1, TraesCS4A02G144200.1.cds1, TraesCS5B02G093800.1, TraesCS5B02G138000.1.cds1, TraesCS5B02G369000.1.cds1, TraesCS5D02G085400.1, TraesCS5D02G191700.1.cds1, TraesCS5D02G194200.1, TraesCS5D02G438700.1, TraesCS6A02G106700.1, TraesCS6A02G384500.1.cds1, TraesCS6B02G203500.1.cds1, TraesCS6B02G219900.1, TraesCS6D02G059800.1.cds1, TraesCS6D02G110200.1.cds1, TraesCS7A02G158700.1, TraesCS7A02G230400.1.cds1, TraesCS7A02G300600.1, TraesCS7B02G248900.1, TraesCSU02G048900.2, TraesCSU02G063300.1.cds1