HalophFGD

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Basic Information
Locus ID: Tel2E01G403600
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 224817877 224820921 - Tel2E01G403600
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.38 78,391.98 Da 53.63 85.66 -0.46
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd14066 STKc_IRAK 379 649 1.64954E-88 -
Pfam PF00069 Protein kinase domain 373 644 1.1E-49 IPR000719
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 352 647 2.43E-78 IPR011009
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 335 450 5.2E-35 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 451 657 3.5E-56 -
SMART SM00220 serkin_6 373 647 1.3E-34 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 373 662 38.732121 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 497 509 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 379 402 - IPR017441
MobiDBLite mobidb-lite consensus disorder prediction 125 147 - -
MobiDBLite mobidb-lite consensus disorder prediction 170 207 - -
MobiDBLite mobidb-lite consensus disorder prediction 186 207 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G21410.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 29. Encodes a cysteine-rich receptor-like protein kinase. 0
RefSeq XP_044323363.1 putative receptor-like protein kinase At4g00960 isoform X1 [Triticum aestivum] 0
Swiss-Prot Q0D5R3 Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 0
TrEMBL A0A3B6C4D9 Cysteine-rich receptor-like protein kinase 10 OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 5 AH03.3262, AH03.3263, CH03.3656, CH03.3657, CH03.3664
Poaceae Eleusine coracana subsp. coracana 8 gene-QOZ80_7AG0570510, gene-QOZ80_7AG0570530 ...
gene-QOZ80_7AG0570810, gene-QOZ80_7AG0570820, gene-QOZ80_7BG0602280, gene-QOZ80_7BG0602290, gene-QOZ80_7BG0602470, gene-QOZ80_7BG0602480
Poaceae Hordeum vulgare 5 HORVU.MOREX.r3.1HG0092670.1, HORVU.MOREX.r3.2HG0138720.1 ...
HORVU.MOREX.r3.2HG0138760.1, HORVU.MOREX.r3.2HG0215640.1, HORVU.MOREX.r3.5HG0501530.1
Poaceae Lolium multiflorum 9 gene-QYE76_003459, gene-QYE76_037441, gene-QYE76_040777 ...
gene-QYE76_040778, gene-QYE76_040780, gene-QYE76_040782, gene-QYE76_040784, gene-QYE76_040788, gene-QYE76_058457
Poaceae Oryza coarctata 3 Oco13G009290, Oco14G009680, Oco14G009690
Poaceae Oryza sativa 5 LOC_Os07g35330.1, LOC_Os07g35340.1, LOC_Os07g35380.1 ...
LOC_Os07g35410.1, LOC_Os07g35540.1
Poaceae Paspalum vaginatum 3 gene-BS78_02G303600, gene-BS78_02G303900 ...
gene-BS78_02G304000
Poaceae Puccinellia tenuiflora 4 Pt_Chr0304240, Pt_Chr0304242, Pt_Chr0304246, Pt_Chr0600823
Poaceae Sporobolus alterniflorus 1 Chr24G009250
Poaceae Thinopyrum elongatum 4 Tel1E01G701400, Tel2E01G403400, Tel2E01G403600 ...
Tel5E01G535300
Poaceae Triticum dicoccoides 7 gene_TRIDC1AG062120, gene_TRIDC1BG071290 ...
gene_TRIDC2AG028730, gene_TRIDC2AG028750, gene_TRIDC2BG032450, gene_TRIDC2BG032470, gene_TRIDC5AG049710
Poaceae Triticum aestivum 11 TraesCS1A02G422600.1, TraesCS1B02G454400.1 ...
TraesCS1D02G431000.2, TraesCS1D02G431400.1, TraesCS2A02G216300.1, TraesCS2B02G241400.1, TraesCS2B02G241600.1, TraesCS2D02G221900.1, TraesCS2D02G222100.2, TraesCS2D02G222400.1, TraesCS5A02G338500.1
Poaceae Zea mays 1 Zm00001eb323380_P003
Poaceae Zoysia japonica 3 nbis-gene-53338, nbis-gene-795, nbis-gene-797
Poaceae Zoysia macrostachya 2 Zma_g5285, Zma_g6589
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.