Basic Information
Locus ID:
Tel2E01G400000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 222492177 | 222493124 | - | Tel2E01G400000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.45 | 35,054.27 Da | 33.46 | 95.97 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 136 | 309 | 1.1E-36 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 5 | 65 | 3.1E-15 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 111 | 313 | 4.71E-62 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 5 | 156 | 5.07E-35 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 213 | 315 | 5.3E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 121 | 212 | 1.6E-31 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 2 | 63 | 8.1E-14 | - |
| SMART | SM00220 | serkin_6 | 136 | 313 | 2.7E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 136 | 315 | 32.018471 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 258 | 270 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 142 | 166 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53810.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_044453078.1 | L-type lectin-domain containing receptor kinase SIT2-like [Triticum aestivum] | 0 |
| Q7XUN6 | L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2 | 0 | |
| TrEMBL | M7YKB0 | L-type lectin-domain containing receptor kinase IV.2 OS=Triticum urartu OX=4572 GN=TRIUR3_17815 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah001977 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30267630 |
| Brassicaceae | Brassica nigra | 1 | BniB02g024140.2N |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G2160 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_007504 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G400000 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC2BG084160 |