HalophFGD

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Basic Information
Locus ID: Tel2E01G391500
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 216568010 216573328 - Tel2E01G391500
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.34 47,802.18 Da 52.99 83.59 -0.16
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 24 82 6.54E-10 IPR036047
MobiDBLite mobidb-lite consensus disorder prediction 1 30 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_037476790.1 uncharacterized protein LOC119354179 [Triticum dicoccoides] 0
TrEMBL A0A8R7PCV3 F-box domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 2 BH05.4119, BH05.4120
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_5AG0397660, gene-QOZ80_5AG0397810 ...
gene-QOZ80_5BG0446200, gene-QOZ80_5BG0446210
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.7HG0647540.1.CDS1
Poaceae Oryza coarctata 3 Oco19G000590, Oco19G000610, Oco20G000640
Poaceae Oryza sativa 2 LOC_Os10g04600.2, LOC_Os10g04610.1
Poaceae Puccinellia tenuiflora 1 Pt_Chr0304287
Poaceae Thinopyrum elongatum 2 Tel2E01G391500, Tel7E01G168600
Poaceae Triticum dicoccoides 4 gene_TRIDC2AG027100, gene_TRIDC2BG031420 ...
gene_TRIDC4AG061040, gene_TRIDC7AG008960
Poaceae Triticum aestivum 6 TraesCS2A02G208500.1.cds1, TraesCS2B02G234900.1.cds1 ...
TraesCS2D02G215200.1.cds1, TraesCS4A02G376400.1.cds1, TraesCS7A02G078100.1.cds1, TraesCS7D02G073500.1.cds1
Poaceae Zoysia macrostachya 1 Zma_g25320
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