Basic Information
Locus ID:
Tel2E01G335900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Belongs to the universal ribosomal protein uS3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 164985653 | 164987626 | + | Tel2E01G335900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.86 | 26,566.86 Da | 33.71 | 98.71 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02413 | 40S_S3_KH | 25 | 105 | 8.45633E-49 | - |
| Pfam | PF07650 | KH domain | 30 | 103 | 3.6E-11 | IPR004044 |
| Pfam | PF00189 | Ribosomal protein S3, C-terminal domain | 116 | 198 | 8.9E-25 | IPR001351 |
| SUPERFAMILY | SSF54821 | Ribosomal protein S3 C-terminal domain | 103 | 201 | 7.32E-28 | IPR036419 |
| SUPERFAMILY | SSF54814 | Prokaryotic type KH domain (KH-domain type II) | 20 | 109 | 6.87E-24 | IPR009019 |
| Gene3D | G3DSA:3.30.300.20 | - | 4 | 102 | 9.0E-41 | IPR015946 |
| Gene3D | G3DSA:3.30.1140.32 | - | 103 | 229 | 5.1E-65 | IPR036419 |
| TIGRFAM | TIGR01008 | uS3_euk_arch: ribosomal protein uS3 | 20 | 220 | 7.1E-68 | IPR005703 |
| ProSiteProfiles | PS50823 | Type-2 KH domain profile. | 31 | 102 | 10.663436 | IPR004044 |
| ProSitePatterns | PS00548 | Ribosomal protein S3 signature. | 157 | 193 | - | IPR018280 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35530.1 | Ribosomal protein S3 family protein. | 0 |
| RefSeq | XP_044455939.1 | 40S ribosomal protein S3-3-like [Triticum aestivum] | 0 |
| Q9FJA6 | Small ribosomal subunit protein uS3x OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1 | 0 | |
| TrEMBL | M7ZRC8 | 40S ribosomal protein S3-3 OS=Triticum urartu OX=4572 GN=TRIUR3_33092 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology