Basic Information
Locus ID:
Tel2E01G328000
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 159040293 | 159046316 | - | Tel2E01G328000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.99 | 78,934.49 Da | 36.50 | 82.16 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 80 | 1.4E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 129 | 186 | 3.7E-11 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 426 | 692 | 2.2E-35 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 250 | 1.96E-39 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 401 | 693 | 3.19E-66 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 384 | 499 | 4.3E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 500 | 716 | 5.0E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 270 | 5.1E-47 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 152 | 174 | 2.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 105 | 130 | 27.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 154 | 175 | 7.727356 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 201 | 223 | 7.350022 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 422 | 696 | 33.332932 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 297 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_044964900.1 | protein STRUBBELIG-RECEPTOR FAMILY 7-like isoform X3 [Hordeum vulgare subsp. vulgare] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8I6WLQ0 | Protein kinase domain-containing protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology