Basic Information
Locus ID:
Tel2E01G293700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 138484922 | 138494965 | - | Tel2E01G293700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 57,597.33 Da | 59.98 | 104.79 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 193 | 456 | 7.06E-11 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 58 | 6.41E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 175 | 496 | 4.7E-12 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 17 | 67 | 8.941087 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051197230.1 | uncharacterized protein LOC127310611 [Lolium perenne] | 0 |
| TrEMBL | A0A3B5Z3K4 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH05.354, AH09.721, CH09.786 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_4AG0319250, gene-QOZ80_4BG0356840 ... |
| Poaceae | Hordeum vulgare | 18 | HORVU.MOREX.r3.1HG0007520.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 19 | gene-QYE76_000820, gene-QYE76_007611, gene-QYE76_007688 ... |
| Poaceae | Oryza coarctata | 10 | Oco07G003640, Oco08G003820, Oco09G015490, Oco09G015500 ... |
| Poaceae | Oryza sativa | 9 | LOC_Os04g30750.1, LOC_Os04g30810.1, LOC_Os04g30830.1 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_01G459900, gene-BS78_09G218700 |
| Poaceae | Puccinellia tenuiflora | 10 | Pt_Chr0102687, Pt_Chr0203147, Pt_Chr0306206, Pt_Chr0503882 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr01G024090, Chr23G014350 |
| Poaceae | Thinopyrum elongatum | 11 | Tel1E01G079600, Tel1E01G411000, Tel1E01G411400 ... |
| Poaceae | Triticum dicoccoides | 16 | gene_TRIDC1AG052530, gene_TRIDC1BG013270 ... |
| Poaceae | Triticum aestivum | 43 | TraesCS1A02G362200.1, TraesCS1A02G362300.1 ... |