Basic Information
Locus ID:
Tel2E01G288800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 136227497 | 136228780 | - | Tel2E01G288800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 48,522.18 Da | 49.09 | 75.83 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 26 | 63 | 5.4E-9 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 24 | 74 | 7.85E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 62 | 9.6E-8 | - |
| SMART | SM00256 | fbox_2 | 26 | 66 | 9.3E-10 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 122 | 334 | 5.9E-16 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 20 | 65 | 11.934954 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43260.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_020168996.1 | F-box protein At3g49450-like [Aegilops tauschii subsp. strangulata] | 0 |
| Q8S8Q9 | F-box/LRR-repeat protein At2g43260 OS=Arabidopsis thaliana OX=3702 GN=At2g43260 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3B6C1P3 | F-box domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.129.V1.1, AsparagusV1_04.132.V1.1 |
| Poaceae | Echinochloa crus-galli | 12 | AH01.2284, AH01.2287, AH02.3093, BH01.2576, BH01.2577 ... |
| Poaceae | Hordeum vulgare | 5 | HORVU.MOREX.r3.2HG0112950.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 23 | gene-QYE76_000501, gene-QYE76_002124, gene-QYE76_005967 ... |
| Poaceae | Oryza coarctata | 2 | Oco09G017100, Oco09G017160 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g49450.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G236300 |
| Poaceae | Puccinellia tenuiflora | 14 | Pt_Chr0100309, Pt_Chr0100311, Pt_Chr0100312, Pt_Chr0100314 ... |
| Poaceae | Thinopyrum elongatum | 6 | Tel2E01G288800, Tel3E01G766900, Tel4E01G067300 ... |
| Poaceae | Triticum aestivum | 16 | TraesCS2A02G142000.1, TraesCS2A02G551700.1.cds1 ... |