Basic Information
Locus ID:
Tel2E01G271600
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
RhoGAP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 126928185 | 126938875 | - | Tel2E01G271600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 94,014.54 Da | 53.46 | 76.83 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00159 | RhoGAP | 176 | 315 | 1.13321E-30 | - |
| CDD | cd00821 | PH | 16 | 115 | 2.7312E-12 | - |
| Pfam | PF00169 | PH domain | 15 | 119 | 4.8E-13 | IPR001849 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 600 | 680 | 1.0E-20 | IPR025757 |
| Pfam | PF00620 | RhoGAP domain | 176 | 320 | 5.0E-31 | IPR000198 |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 176 | 369 | 7.26E-34 | IPR008936 |
| SUPERFAMILY | SSF50729 | PH domain-like | 10 | 126 | 2.38E-18 | - |
| Gene3D | G3DSA:2.30.29.30 | - | 5 | 121 | 5.3E-17 | IPR011993 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 146 | 369 | 5.2E-42 | IPR008936 |
| SMART | SM00324 | RhoGAP_3 | 173 | 364 | 2.2E-23 | IPR000198 |
| SMART | SM00233 | PH_update | 14 | 122 | 6.6E-17 | IPR001849 |
| ProSiteProfiles | PS50003 | PH domain profile. | 13 | 120 | 15.3672 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 167 | 367 | 30.046919 | IPR000198 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 745 | 797 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 763 | 783 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 396 | 413 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 413 | - | - |
| Coils | Coil | Coil | 597 | 624 | - | - |
| Coils | Coil | Coil | 649 | 683 | - | - |
| Coils | Coil | Coil | 803 | 823 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_020147985.1 | rho GTPase-activating protein 7 isoform X5 [Aegilops tauschii subsp. strangulata] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A453AU75 | Rho GTPase-activating protein 7-like OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology