HalophFGD

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Basic Information
Locus ID: Tel2E01G250300
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: Protein of unknown function (DUF1668)
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 117085625 117086785 - Tel2E01G250300
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.51 41,758.85 Da 59.62 57.59 -0.42
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF07893 Protein of unknown function (DUF1668) 4 125 7.7E-15 IPR012871
Pfam PF07893 Protein of unknown function (DUF1668) 260 376 5.4E-21 IPR012871
MobiDBLite mobidb-lite consensus disorder prediction 41 55 - -
MobiDBLite mobidb-lite consensus disorder prediction 150 179 - -
MobiDBLite mobidb-lite consensus disorder prediction 122 139 - -
MobiDBLite mobidb-lite consensus disorder prediction 41 61 - -
MobiDBLite mobidb-lite consensus disorder prediction 122 179 - -
MobiDBLite mobidb-lite consensus disorder prediction 200 226 - -
MobiDBLite mobidb-lite consensus disorder prediction 200 221 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044327723.1 uncharacterized protein LOC123048747 [Triticum aestivum] 0
TrEMBL A0A3B6AST3 DUF1618 domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH03.3014, AH07.3729, BH01.3192, BH01.5005, BH07.3553 ...
CH07.3622, CH07.3623
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_2BG0204150, gene-QOZ80_2BG0205010 ...
gene-QOZ80_2BG0205430, gene-QOZ80_3AG0230710, gene-QOZ80_3AG0232630, gene-QOZ80_3BG0297150, gene-QOZ80_5AG0366800
Poaceae Hordeum vulgare 4 HORVU.MOREX.r3.5HG0462090.1.CDS1 ...
HORVU.MOREX.r3.5HG0473320.1.CDS1, HORVU.MOREX.r3.5HG0487520.1.CDS1, HORVU.MOREX.r3.6HG0558090.1.CDS1
Poaceae Lolium multiflorum 11 gene-QYE76_001971, gene-QYE76_002059, gene-QYE76_006007 ...
gene-QYE76_020283, gene-QYE76_020292, gene-QYE76_020323, gene-QYE76_020506, gene-QYE76_049928, gene-QYE76_059716, gene-QYE76_059718, gene-QYE76_065978
Poaceae Oryza coarctata 5 Oco01G002310, Oco01G005560, Oco02G005640, Oco04G002260 ...
Oco06G026770
Poaceae Oryza sativa 12 LOC_Os01g12330.1, LOC_Os02g04900.1, LOC_Os02g05070.1 ...
LOC_Os02g05080.1, LOC_Os02g05120.1, LOC_Os02g05190.1, LOC_Os02g05350.1, LOC_Os02g05360.1, LOC_Os02g05430.1, LOC_Os02g05810.2, LOC_Os03g08690.1, LOC_Os03g13984.1
Poaceae Paspalum vaginatum 4 gene-BS78_04G301100, gene-BS78_04G304500 ...
gene-BS78_04G305700, gene-BS78_10G161300
Poaceae Puccinellia tenuiflora 6 Pt_Chr0202690, Pt_Chr0202744, Pt_Chr0202745, Pt_Chr0202746 ...
Pt_Chr0202801, Pt_Chr0207429
Poaceae Sporobolus alterniflorus 5 Chr01G017040, Chr06G000270, Chr0G032880, Chr15G001470 ...
Chr18G011610
Poaceae Thinopyrum elongatum 3 Tel2E01G250300, Tel3E01G567200, Tel3E01G567700
Poaceae Triticum dicoccoides 1 gene_TRIDC3BG025440
Poaceae Triticum aestivum 17 TraesCS1A02G191000.1.cds1, TraesCS1A02G293700.1.cds1 ...
TraesCS1B02G302800.1.cds1, TraesCS1D02G298200.1.cds1, TraesCS2A02G113300.1.cds1, TraesCS2A02G113400.1.cds1, TraesCS2A02G118900.1.cds1, TraesCS2D02G113800.1.cds1, TraesCS2D02G116400.1.cds1, TraesCS3A02G436700.1.cds1, TraesCS3B02G387100.1.cds1, TraesCS3B02G387300.1.cds1, TraesCS3B02G402300.1, TraesCS3D02G363300.1, TraesCS5A02G038600.1.cds1, TraesCS5B02G040200.1.cds1, TraesCS6B02G142300.1.cds1
Poaceae Zoysia japonica 4 nbis-gene-25157, nbis-gene-58900, nbis-gene-59033 ...
nbis-gene-8560
Poaceae Zoysia macrostachya 2 Zma_g28580, Zma_g28590
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.