HalophFGD

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Basic Information
Locus ID: Tel2E01G176800
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: FBD
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 80328933 80330570 - Tel2E01G176800
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.90 55,005.95 Da 47.41 92.06 -0.19
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08387 FBD 408 449 1.0E-9 IPR006566
SUPERFAMILY SSF81383 F-box domain 61 110 1.83E-6 IPR036047
SUPERFAMILY SSF52047 RNI-like 193 390 1.73E-5 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G27050.1 F-box/RNI-like superfamily protein. 0
RefSeq XP_037480366.1 putative F-box/FBD/LRR-repeat protein At5g56810 [Triticum dicoccoides] 0
TrEMBL A0A453AJ70 FBD domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 1 BH08.455
Poaceae Lolium multiflorum 2 gene-QYE76_031948, gene-QYE76_031952
Poaceae Oryza sativa 2 LOC_Os07g18610.1, LOC_Os07g18630.1
Poaceae Thinopyrum elongatum 2 Tel2E01G176800, Tel2E01G180200
Poaceae Triticum aestivum 5 TraesCS2A02G082700.1, TraesCS2A02G082800.1 ...
TraesCS2A02G082900.1, TraesCS2B02G096900.2, TraesCS2D02G080700.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.