HalophFGD

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Basic Information
Locus ID: Tel2E01G168300
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: POZ domain binding
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 76530739 76532779 + Tel2E01G168300
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.47 70,182.41 Da 43.45 90.16 -0.19
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00888 Cullin family 207 608 2.5E-29 IPR001373
SUPERFAMILY SSF74788 Cullin repeat-like 201 548 2.46E-26 IPR016159
Gene3D G3DSA:1.20.1310.10 Cullin Repeats 195 330 9.7E-6 -
Gene3D G3DSA:1.20.1310.10 Cullin Repeats 331 493 4.9E-9 -
Gene Ontology
Biological Process:
GO:0006511 (ubiquitin-dependent protein catabolic process)
Molecular Function:
GO:0031625 (ubiquitin protein ligase binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_024388523.1 cullin-3A-like [Physcomitrium patens] 0
TrEMBL A9RVN5 CULLIN_2 domain-containing protein OS=Physcomitrium patens OX=3218 GN=PHYPA_015310 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Lolium multiflorum 1 gene-QYE76_025795
Poaceae Thinopyrum elongatum 1 Tel2E01G168300
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