Basic Information
Locus ID:
Tel2E01G1044900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Chitinase class I
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 730382712 | 730384167 | + | Tel2E01G1044900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.49 | 30,510.02 Da | 36.02 | 65.47 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06921 | ChtBD1_GH19_hevein | 34 | 73 | 4.18555E-16 | - |
| CDD | cd00325 | chitinase_GH19 | 96 | 255 | 1.51212E-58 | - |
| Pfam | PF00187 | Chitin recognition protein | 35 | 72 | 4.8E-11 | IPR001002 |
| Pfam | PF00182 | Chitinase class I | 161 | 256 | 5.0E-52 | IPR000726 |
| Pfam | PF00182 | Chitinase class I | 95 | 160 | 3.4E-21 | IPR000726 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 94 | 258 | 1.52E-65 | IPR023346 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 35 | 82 | 1.24E-11 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 95 | 159 | 3.6E-19 | - |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 160 | 196 | 2.6E-50 | - |
| Gene3D | G3DSA:1.10.530.10 | - | 197 | 257 | 2.6E-50 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 33 | 75 | 9.2E-14 | IPR036861 |
| SMART | SM00270 | ChitinBD_3 | 35 | 72 | 6.7E-14 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 159 | 261 | 1.2E-40 | IPR016283 |
| PIRSF | PIRSF001060 | Endochitinase | 7 | 161 | 1.3E-36 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 33 | 74 | 10.597433 | IPR001002 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 111 | 134 | - | IPR000726 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 200 | 210 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 45 | 64 | - | IPR018371 |
| PRINTS | PR00451 | Chitin-binding domain signature | 58 | 65 | 1.9E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 43 | 51 | 1.9E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 51 | 58 | 1.9E-6 | IPR001002 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 296 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_044321252.1 | chitinase 2-like [Triticum aestivum] | 0 |
| Q7DNA1 | Chitinase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6CHL3 | chitinase OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology