Basic Information
Locus ID:
Tel2E01G1042200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Chitinase class I
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 729492147 | 729493480 | + | Tel2E01G1042200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.80 | 35,188.98 Da | 24.66 | 64.52 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 83 | 315 | 1.22749E-111 | - |
| CDD | cd00035 | ChtBD1 | 32 | 69 | 5.22756E-15 | - |
| Pfam | PF00187 | Chitin recognition protein | 32 | 69 | 1.2E-10 | IPR001002 |
| Pfam | PF00182 | Chitinase class I | 82 | 315 | 6.7E-129 | IPR000726 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 79 | 321 | 9.0E-107 | IPR023346 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 32 | 74 | 5.24E-10 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 87 | 321 | 1.8E-118 | - |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 165 | 224 | 1.8E-118 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 30 | 72 | 1.7E-13 | IPR036861 |
| SMART | SM00270 | ChitinBD_3 | 32 | 69 | 4.6E-13 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 3 | 322 | 1.6E-126 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 30 | 71 | 10.706826 | IPR001002 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 100 | 122 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 42 | 61 | - | IPR018371 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 228 | 238 | - | IPR000726 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_037480220.1 | basic endochitinase C-like [Triticum dicoccoides] | 0 |
| Q9FRV1 | Basic endochitinase A OS=Secale cereale OX=4550 GN=rsca PE=1 SV=1 | 0 | |
| TrEMBL | A0A453DLJ7 | chitinase OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology