Basic Information
Locus ID:
Tel2E01G1034100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 726529827 | 726535229 | + | Tel2E01G1034100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.62 | 128,637.38 Da | 46.45 | 98.67 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 217 | 438 | 1.4E-38 | IPR002182 |
| Pfam | PF18052 | Rx N-terminal domain | 43 | 110 | 9.0E-9 | IPR041118 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 163 | 461 | 3.05E-58 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 519 | 887 | 9.52E-29 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 810 | 1127 | 6.8E-33 | - |
| Gene3D | G3DSA:1.20.5.4130 | - | 35 | 149 | 2.3E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 538 | 891 | 9.9E-31 | IPR032675 |
| Gene3D | G3DSA:1.10.10.10 | - | 446 | 530 | 3.6E-13 | IPR036388 |
| Gene3D | G3DSA:1.10.8.430 | - | 362 | 445 | 7.9E-7 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 892 | 1029 | 1.6E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1030 | 1131 | 6.8E-12 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 159 | 357 | 2.1E-30 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 224 | 239 | 8.0E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 783 | 799 | 8.0E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 398 | 412 | 8.0E-15 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 297 | 311 | 8.0E-15 | - |
| Coils | Coil | Coil | 280 | 300 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14470.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_044411415.1 | disease resistance protein RGA2-like isoform X1 [Triticum aestivum] | 0 |
| Q9LRR4 | Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RPPL1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6PJH8 | NB-ARC domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30229810 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103700211 |
| Poaceae | Echinochloa crus-galli | 1 | CH07.1044 |
| Poaceae | Hordeum vulgare | 6 | HORVU.MOREX.r3.1HG0005640.1, HORVU.MOREX.r3.5HG0529550.1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_000489, gene-QYE76_047577 |
| Poaceae | Oryza coarctata | 5 | Oco04G008120, Oco14G016700, Oco23G006660, Oco24G006330 ... |
| Poaceae | Oryza sativa | 10 | LOC_Os02g18000.1, LOC_Os02g18070.1, LOC_Os02g18080.1 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_04G121500, gene-BS78_08G073100, gene-BS78_K161200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0202529 |
| Poaceae | Thinopyrum elongatum | 22 | Tel1E01G609700, Tel2E01G100400, Tel2E01G1032200 ... |
| Poaceae | Triticum dicoccoides | 30 | gene_TRIDC1AG050140, gene_TRIDC1BG056960 ... |
| Poaceae | Triticum aestivum | 49 | TraesCS1B02G044100.1, TraesCS1B02G044200.3 ... |