Basic Information
Locus ID:
Tel2E01G1032200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 725905639 | 725912843 | + | Tel2E01G1032200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.32 | 145,811.48 Da | 49.01 | 94.80 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 219 | 432 | 1.4E-40 | IPR002182 |
| Pfam | PF00931 | NB-ARC domain | 1084 | 1274 | 6.0E-38 | IPR002182 |
| Pfam | PF18052 | Rx N-terminal domain | 44 | 108 | 9.2E-8 | IPR041118 |
| Pfam | PF18052 | Rx N-terminal domain | 901 | 968 | 2.7E-7 | IPR041118 |
| SUPERFAMILY | SSF52058 | L domain-like | 520 | 879 | 1.25E-23 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1020 | 1274 | 6.76E-45 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 174 | 462 | 5.62E-55 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 598 | 882 | 7.4E-25 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 159 | 359 | 7.7E-32 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 363 | 446 | 1.9E-6 | IPR042197 |
| Gene3D | G3DSA:1.20.5.4130 | - | 26 | 135 | 1.5E-5 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 447 | 530 | 3.1E-10 | IPR036388 |
| Gene3D | G3DSA:3.40.50.300 | - | 1022 | 1218 | 5.2E-29 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 399 | 413 | 2.4E-13 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 298 | 312 | 2.4E-13 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 730 | 746 | 2.4E-13 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 224 | 239 | 2.4E-13 | - |
| Coils | Coil | Coil | 936 | 956 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14470.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_044326855.1 | putative disease resistance protein RGA4 [Triticum aestivum] | 0 |
| Q9LRR4 | Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=RPPL1 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3B6CGG3 | NB-ARC domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30229810 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103700211 |
| Poaceae | Echinochloa crus-galli | 1 | CH07.1044 |
| Poaceae | Hordeum vulgare | 6 | HORVU.MOREX.r3.1HG0005640.1, HORVU.MOREX.r3.5HG0529550.1 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_000489, gene-QYE76_047577 |
| Poaceae | Oryza coarctata | 5 | Oco04G008120, Oco14G016700, Oco23G006660, Oco24G006330 ... |
| Poaceae | Oryza sativa | 10 | LOC_Os02g18000.1, LOC_Os02g18070.1, LOC_Os02g18080.1 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_04G121500, gene-BS78_08G073100, gene-BS78_K161200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0202529 |
| Poaceae | Thinopyrum elongatum | 22 | Tel1E01G609700, Tel2E01G100400, Tel2E01G1032200 ... |
| Poaceae | Triticum dicoccoides | 30 | gene_TRIDC1AG050140, gene_TRIDC1BG056960 ... |
| Poaceae | Triticum aestivum | 49 | TraesCS1B02G044100.1, TraesCS1B02G044200.3 ... |