Basic Information
Locus ID:
Tel2E01G1030200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 725178516 | 725183836 | + | Tel2E01G1030200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 120,865.93 Da | 47.36 | 88.62 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14708 | bZIP_HBP1b-like | 994 | 1040 | 1.09284E-22 | - |
| Pfam | PF00931 | NB-ARC domain | 350 | 440 | 5.3E-9 | IPR002182 |
| Pfam | PF00170 | bZIP transcription factor | 992 | 1030 | 1.2E-6 | IPR004827 |
| Pfam | PF18052 | Rx N-terminal domain | 104 | 184 | 1.0E-8 | IPR041118 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 322 | 527 | 1.96E-29 | IPR027417 |
| SUPERFAMILY | SSF57959 | Leucine zipper domain | 994 | 1037 | 1.27E-6 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 597 | 854 | 3.06E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 611 | 862 | 8.7E-10 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 327 | 441 | 4.8E-14 | IPR027417 |
| Gene3D | G3DSA:1.20.5.4130 | - | 103 | 217 | 1.4E-14 | - |
| Gene3D | G3DSA:1.10.10.10 | - | 507 | 610 | 2.5E-11 | IPR036388 |
| Gene3D | G3DSA:1.20.5.170 | - | 993 | 1043 | 1.5E-9 | - |
| SMART | SM00338 | brlzneu | 990 | 1066 | 3.0E-6 | IPR004827 |
| ProSiteProfiles | PS50217 | Basic-leucine zipper (bZIP) domain profile. | 992 | 1036 | 8.840881 | IPR004827 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 893 | 915 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1032 | 1059 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 980 | 1012 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 983 | 1002 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1032 | 1071 | - | - |
| Coils | Coil | Coil | 1013 | 1040 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G58390.1 | Disease resistance protein (CC-NBS-LRR class) family. | 0 |
| RefSeq | XP_048547175.1 | disease resistance protein RGA5-like isoform X1 [Triticum urartu] | 0 |
| F7J0N2 | Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8R7R2Z4 | BTB domain-containing protein OS=Triticum urartu OX=4572 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH02.2484 |
| Poaceae | Hordeum vulgare | 8 | HORVU.MOREX.r3.5HG0534540.1, HORVU.MOREX.r3.6HG0550480.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_006977, gene-QYE76_048723, gene-QYE76_048728 ... |
| Poaceae | Oryza sativa | 1 | LOC_Os10g22484.1 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0205164, Pt_Chr0205206 |
| Poaceae | Thinopyrum elongatum | 3 | Tel2E01G1030200, Tel7E01G023300, Tel7E01G062300 |
| Poaceae | Triticum dicoccoides | 10 | gene_TRIDC4AG067680, gene_TRIDC4AG068620 ... |
| Poaceae | Triticum aestivum | 22 | TraesCS1D02G381400.1, TraesCS2D02G511600.2 ... |