Basic Information
Locus ID:
Tel2E01G102500
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 45013922 | 45015765 | - | Tel2E01G102500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.21 | 64,475.56 Da | 34.19 | 88.07 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 36 | 273 | 1.64766E-73 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 348 | 564 | 8.4E-36 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 41 | 278 | 4.7E-58 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 40 | 280 | 4.34E-62 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 333 | 563 | 1.78E-57 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 441 | 572 | 1.1E-35 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 37 | 282 | 1.9E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 320 | 422 | 1.1E-23 | - |
| SMART | SM00220 | serkin_6 | 347 | 577 | 1.6E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 347 | 580 | 31.9478 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 487 | 499 | - | IPR008271 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 160 | 166 | - | IPR019825 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 353 | 376 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65600.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_044329875.1 | L-type lectin-domain containing receptor kinase IX.1-like [Triticum aestivum] | 0 |
| Q9LSL5 | L-type lectin-domain containing receptor kinase IX.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK92 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6D4T6 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH03.1787, CH03.1958 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0100870.1.CDS1 ... |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G156100, gene-BS78_05G241600 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0107997 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr14G012180 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G102500, Tel3E01G784700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG004410, gene_TRIDC2AG004420 |
| Poaceae | Triticum aestivum | 11 | TraesCS2B02G054500.1, TraesCS2D02G040700.1 ... |