Basic Information
Locus ID:
Tel2E01G1019200
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 721393526 | 721399596 | + | Tel2E01G1019200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.41 | 67,360.01 Da | 35.78 | 89.79 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 330 | 566 | 8.6E-44 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 40 | 139 | 8.0E-18 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 162 | 243 | 4.9E-6 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 314 | 610 | 4.45E-66 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 150 | 246 | 4.6E-9 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 301 | 408 | 1.2E-26 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 35 | 142 | 4.9E-22 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 413 | 616 | 4.9E-49 | - |
| SMART | SM00220 | serkin_6 | 329 | 609 | 6.7E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 329 | 618 | 36.668556 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 34 | 142 | 18.109177 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 147 | 246 | 11.419674 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 460 | 472 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 335 | 361 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.2 | - | 0 |
| RefSeq | XP_044335728.1 | cysteine-rich receptor-like protein kinase 10 [Triticum aestivum] | 0 |
| O65479 | Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CRK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3B6DPD7 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | BH05.601, CH01.3028, CH04.309 |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_003593, gene-QYE76_017906, gene-QYE76_019077 ... |
| Poaceae | Oryza coarctata | 1 | Oco09G005110 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g10540.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G170900, gene-BS78_08G007300 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0106389, Pt_Chr0106422, Pt_Chr0501231, Pt_Chr0604613 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr09G007730, Chr13G017140 |
| Poaceae | Thinopyrum elongatum | 8 | Tel1E01G497600, Tel2E01G092800, Tel2E01G1016400 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2B02G628100.1, TraesCS2B02G628200.1 ... |