Basic Information
Locus ID:
Tel2E01G1016700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 720051869 | 720055049 | + | Tel2E01G1016700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.76 | 67,730.48 Da | 31.18 | 87.64 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 330 | 602 | 6.8E-45 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 37 | 136 | 1.2E-18 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 168 | 242 | 5.2E-7 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 315 | 609 | 6.07E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 415 | 614 | 1.1E-46 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 149 | 245 | 1.8E-10 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 33 | 139 | 1.9E-22 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 301 | 413 | 3.3E-28 | - |
| SMART | SM00220 | serkin_6 | 329 | 612 | 3.1E-20 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 31 | 139 | 18.389791 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 329 | 612 | 35.566105 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 145 | 245 | 12.207207 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 457 | 469 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 335 | 366 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_045089432.1 | cysteine-rich receptor-like protein kinase 10 [Aegilops tauschii subsp. strangulata] | 0 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 0 | |
| TrEMBL | R7WCN9 | Cysteine-rich receptor-like protein kinase 25 OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | BH05.601, CH01.3028, CH04.309 |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_003593, gene-QYE76_017906, gene-QYE76_019077 ... |
| Poaceae | Oryza coarctata | 1 | Oco09G005110 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g10540.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G170900, gene-BS78_08G007300 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0106389, Pt_Chr0106422, Pt_Chr0501231, Pt_Chr0604613 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr09G007730, Chr13G017140 |
| Poaceae | Thinopyrum elongatum | 8 | Tel1E01G497600, Tel2E01G092800, Tel2E01G1016400 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2B02G628100.1, TraesCS2B02G628200.1 ... |