Basic Information
Locus ID:
Tel2E01G1016400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 719970395 | 719974032 | + | Tel2E01G1016400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.85 | 32,529.50 Da | 37.04 | 80.42 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 30 | 129 | 2.6E-19 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 158 | 235 | 4.1E-8 | IPR002902 |
| Gene3D | G3DSA:3.30.430.20 | - | 26 | 132 | 5.0E-23 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 141 | 238 | 5.3E-12 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 24 | 132 | 18.579885 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 137 | 238 | 12.379197 | IPR002902 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_045089432.1 | cysteine-rich receptor-like protein kinase 10 [Aegilops tauschii subsp. strangulata] | 0 |
| P0DO63 | Antimicrobial ginkbilobin-2-like protein OS=Castanea crenata OX=103480 GN=GNK2L PE=2 SV=1 | 0 | |
| TrEMBL | A0A453DKE1 | Cysteine-rich receptor-like protein kinase 25 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | BH05.601, CH01.3028, CH04.309 |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_003593, gene-QYE76_017906, gene-QYE76_019077 ... |
| Poaceae | Oryza coarctata | 1 | Oco09G005110 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g10540.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G170900, gene-BS78_08G007300 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0106389, Pt_Chr0106422, Pt_Chr0501231, Pt_Chr0604613 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr09G007730, Chr13G017140 |
| Poaceae | Thinopyrum elongatum | 8 | Tel1E01G497600, Tel2E01G092800, Tel2E01G1016400 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2B02G628100.1, TraesCS2B02G628200.1 ... |