Basic Information
Locus ID:
Tel2E01G096700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
RING-variant domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 42174912 | 42178077 | - | Tel2E01G096700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 52,619.44 Da | 59.22 | 80.12 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 241 | 289 | 5.75905E-15 | - |
| Pfam | PF12906 | RING-variant domain | 241 | 288 | 9.8E-11 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 237 | 292 | 1.94E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 226 | 296 | 1.1E-14 | IPR013083 |
| SMART | SM00744 | ringv_2 | 240 | 289 | 3.7E-16 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 233 | 295 | 18.482882 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G60580.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_037471932.1 | uncharacterized protein LOC119346984 isoform X2 [Triticum dicoccoides] | 0 |
| TrEMBL | A0A8R7P9D6 | RING-CH-type domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology