Basic Information
Locus ID:
Tel2E01G072400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 33209689 | 33211590 | - | Tel2E01G072400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.59 | 26,383.87 Da | 45.36 | 76.39 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 119 | 216 | 9.56E-9 | IPR027417 |
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 54 | 93 | 1.7E-5 | IPR015300 |
| Gene3D | G3DSA:3.40.50.300 | - | 118 | 223 | 3.1E-7 | IPR027417 |
| Gene3D | G3DSA:2.40.330.10 | - | 10 | 96 | 8.7E-6 | IPR015300 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_020168092.1 | disease resistance protein Pik-2 [Aegilops tauschii subsp. strangulata] | 0 |
| TrEMBL | A0A453DC25 | Rx_N domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH01.1546, BH02.1349 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0245280.1 |
| Poaceae | Thinopyrum elongatum | 34 | Tel1E01G099300, Tel1E01G144300, Tel1E01G372700 ... |
| Poaceae | Triticum dicoccoides | 10 | gene_TRIDC1AG019590, gene_TRIDC1AG026440 ... |
| Poaceae | Triticum aestivum | 31 | TraesCS1A02G172200.1, TraesCS1A02G173300.1 ... |