Basic Information
Locus ID:
Tel2E01G069100
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Involved in ribosomal large subunit assembly
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 32043479 | 32057059 | - | Tel2E01G069100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.26 | 41,944.07 Da | 57.65 | 73.57 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 190 | 252 | 6.28E-5 | IPR015300 |
| Gene3D | G3DSA:2.40.330.10 | - | 152 | 262 | 9.3E-6 | IPR015300 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_037471077.1 | B3 domain-containing protein Os03g0164300-like [Triticum dicoccoides] | 0 |
| TrEMBL | A0A453KNN5 | TF-B3 domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | BH01.1546, BH02.1349 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0245280.1 |
| Poaceae | Thinopyrum elongatum | 34 | Tel1E01G099300, Tel1E01G144300, Tel1E01G372700 ... |
| Poaceae | Triticum dicoccoides | 10 | gene_TRIDC1AG019590, gene_TRIDC1AG026440 ... |
| Poaceae | Triticum aestivum | 31 | TraesCS1A02G172200.1, TraesCS1A02G173300.1 ... |