Basic Information
Locus ID:
Tel2E01G056900
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
MSP (Major sperm protein) domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 25191715 | 25199277 | + | Tel2E01G056900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 110,786.63 Da | 44.09 | 86.43 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00635 | MSP (Major sperm protein) domain | 376 | 489 | 4.4E-14 | IPR000535 |
| Pfam | PF00069 | Protein kinase domain | 85 | 355 | 4.0E-48 | IPR000719 |
| Pfam | PF00092 | von Willebrand factor type A domain | 537 | 691 | 1.2E-13 | IPR002035 |
| Pfam | PF14624 | VWA / Hh protein intein-like | 884 | 947 | 5.7E-10 | IPR032838 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 68 | 364 | 8.06E-65 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 363 | 510 | 6.02E-20 | IPR008962 |
| SUPERFAMILY | SSF53300 | vWA-like | 533 | 692 | 1.34E-23 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 537 | 707 | 2.7E-31 | IPR036465 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 373 | 509 | 1.7E-21 | IPR013783 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 63 | 153 | 7.3E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 177 | 372 | 9.7E-44 | - |
| SMART | SM00220 | serkin_6 | 84 | 359 | 2.1E-33 | IPR000719 |
| SMART | SM00327 | VWA_4 | 535 | 695 | 1.4E-12 | IPR002035 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 375 | 505 | 15.586618 | IPR000535 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 84 | 359 | 37.149113 | IPR000719 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 537 | 708 | 14.65549 | IPR002035 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 90 | 111 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 218 | 230 | - | IPR008271 |
| Coils | Coil | Coil | 974 | 990 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54780.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_044318868.1 | uncharacterized protein LOC123039958 [Triticum aestivum] | 0 |
| Q9XEC6 | Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana OX=3702 GN=CRK36 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3B6BX13 | Protein kinase domain-containing protein OS=Triticum aestivum OX=4565 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_000141 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G056900 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC2BG002000 |
| Poaceae | Triticum aestivum | 1 | TraesCS2B02G025500.1 |