Basic Information
Locus ID:
Tel2E01G010800
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
von Willebrand factor (vWF) type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 5740039 | 5749193 | - | Tel2E01G010800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 76,339.04 Da | 31.74 | 80.47 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00198 | vWFA | 291 | 446 | 1.22827E-6 | - |
| Pfam | PF00069 | Protein kinase domain | 23 | 254 | 2.3E-46 | IPR000719 |
| SUPERFAMILY | SSF53300 | vWA-like | 570 | 672 | 9.54E-9 | IPR036465 |
| SUPERFAMILY | SSF53300 | vWA-like | 290 | 449 | 8.49E-8 | IPR036465 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 245 | 7.15E-64 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 92 | 1.5E-22 | - |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 294 | 455 | 7.5E-7 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 535 | 670 | 1.7E-8 | IPR036465 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 114 | 292 | 5.3E-40 | - |
| SMART | SM00220 | serkin_6 | 23 | 289 | 6.5E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 23 | 384 | 34.788734 | IPR000719 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 590 | 672 | 9.00252 | IPR002035 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 29 | 50 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 159 | 171 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00970.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 41. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_044433691.1 | uncharacterized protein LOC123159947 isoform X2 [Triticum aestivum] | 0 |
| O23081 | Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana OX=3702 GN=CRK41 PE=3 SV=2 | 0 | |
| TrEMBL | A0A811QEZ9 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS39527 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH04.2110 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0095880.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_05G188400, gene-BS78_05G188600, gene-BS78_K280100 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0205824 |
| Poaceae | Thinopyrum elongatum | 5 | Tel2E01G009600, Tel2E01G010800, Tel7E01G005600 ... |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC2AG000300, gene_TRIDC2BG000030 ... |
| Poaceae | Triticum aestivum | 13 | TraesCS2A02G003000.1, TraesCS2B02G000200.1 ... |