Basic Information
Locus ID:
Tel2E01G005400
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 2279765 | 2302299 | + | Tel2E01G005400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 127,333.60 Da | 37.63 | 86.03 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 823 | 1102 | 2.59186E-43 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 938 | 977 | 0.0027 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 900 | 934 | 0.0029 | IPR001680 |
| Pfam | PF00069 | Protein kinase domain | 380 | 651 | 3.8E-30 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 17 | 298 | 1.6E-45 | IPR000719 |
| Pfam | PF00400 | WD domain, G-beta repeat | 1027 | 1064 | 6.9E-7 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 300 | 3.64E-67 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 661 | 801 | 1.31E-9 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 344 | 653 | 5.8E-52 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 816 | 1101 | 3.66E-54 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 816 | 1107 | 8.8E-72 | IPR015943 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 87 | 4.0E-23 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 671 | 800 | 1.1E-13 | IPR013783 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 339 | 442 | 2.3E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 109 | 318 | 2.1E-47 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 465 | 670 | 1.1E-39 | - |
| SMART | SM00220 | serkin_6 | 369 | 657 | 4.7E-10 | IPR000719 |
| SMART | SM00320 | WD40_4 | 893 | 934 | 0.0015 | IPR001680 |
| SMART | SM00220 | serkin_6 | 17 | 307 | 5.6E-28 | IPR000719 |
| SMART | SM00320 | WD40_4 | 850 | 890 | 41.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1025 | 1064 | 1.3E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 937 | 977 | 2.3E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 808 | 847 | 16.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 981 | 1022 | 2.1 | IPR001680 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 673 | 796 | 8.63622 | IPR000535 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 944 | 979 | 11.678087 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 944 | 979 | 9.757418 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 1032 | 1064 | 11.73468 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 1032 | 1064 | 14.184453 | IPR001680 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 17 | 307 | 37.474194 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 369 | 656 | 28.598042 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 23 | 45 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 152 | 164 | - | IPR008271 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 505 | 517 | - | IPR008266 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_040259340.1 | uncharacterized protein LOC109769424 [Aegilops tauschii subsp. strangulata] | 0 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 0 | |
| TrEMBL | A0A453E1H2 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_8BG0645030, gene-QOZ80_9AG0672230 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_049245 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G005400, Tel3E01G846300 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG003560 |
| Poaceae | Triticum aestivum | 6 | TraesCS1B02G294900.1, TraesCS1D02G284700.1 ... |