HalophFGD

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Basic Information
Locus ID: Tel1E01G723400
Species & Taxonomic ID: Thinopyrum elongatum & 4588
Genome Assembly: GWHABKY00000000
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
chr1 537602271 537603140 - Tel1E01G723400
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.59 17,520.99 Da 72.79 90.94 -0.14
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 50 90 8.3E-10 IPR001810
SUPERFAMILY SSF81383 F-box domain 49 95 1.31E-12 IPR036047
Gene3D G3DSA:1.20.1280.50 - 43 90 2.7E-8 -
SMART SM00256 fbox_2 51 91 9.1E-6 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_020166761.1 F-box protein At5g07610-like [Aegilops tauschii subsp. strangulata] 0
TrEMBL A0A8R7TB04 F-box domain-containing protein OS=Triticum urartu OX=4572 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Thinopyrum elongatum 1 Tel1E01G723400
Portulacaceae Portulaca oleracea 23 evm.TU.LG03.1144, evm.TU.LG03.179, evm.TU.LG03.180 ...
evm.TU.LG03.181, evm.TU.LG03.182, evm.TU.LG03.183, evm.TU.LG03.184, evm.TU.LG03.1951, evm.TU.LG03.200, evm.TU.LG04.1459, evm.TU.LG05.1983, evm.TU.LG12.1521, evm.TU.LG12.1534, evm.TU.LG12.1536, evm.TU.LG13.323, evm.TU.LG13.324, evm.TU.LG13.331, evm.TU.LG21.28, evm.TU.LG21.29, evm.TU.LG21.30, evm.TU.LG21.37, evm.TU.LG24.753, evm.TU.LG26.201
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.