Basic Information
Locus ID:
Tel1E01G710700
Species & Taxonomic ID:
Thinopyrum elongatum & 4588
Genome Assembly:
GWHABKY00000000
Description:
Holliday junction DNA helicase ruvB N-terminus
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 530729567 | 530731037 | + | Tel1E01G710700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 26,460.36 Da | 45.22 | 87.90 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17862 | AAA+ lid domain | 115 | 151 | 3.1E-11 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 53 | 92 | 1.5E-4 | IPR003959 |
| Pfam | PF00124 | Photosynthetic reaction centre protein | 1 | 45 | 4.6E-14 | IPR000484 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 39 | 166 | 1.98E-20 | IPR027417 |
| SUPERFAMILY | SSF81483 | Bacterial photosystem II reaction centre, L and M subunits | 1 | 44 | 1.83E-16 | IPR036854 |
| Gene3D | G3DSA:1.20.85.10 | - | 1 | 55 | 6.2E-14 | IPR036854 |
| Gene3D | G3DSA:1.10.8.60 | - | 94 | 220 | 1.6E-23 | - |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 65 | 84 | - | IPR003960 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_037428130.1 | uncharacterized AAA domain-containing protein C16E9.10c-like [Triticum dicoccoides] | 0 |
| Q7ZZ25 | Outer mitochondrial transmembrane helix translocase OS=Danio rerio OX=7955 GN=atad1a PE=2 SV=2 | 0 | |
| TrEMBL | A0A453A1B9 | AAA domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology